1986 Major League Baseball Draft Pick Transactions
Rounds 41 - 49
Rounds 1-10 Rounds 11-20 Rounds 21-30 Rounds 31-40 Rounds 41-49
| Overall # | Round # | Team | Player Drafted |
| Round 41 | |||
| 861 | 41-1 | Braves | Tim Lindsay |
| 862 | 41-2 | Astros | Eric Bridge |
| 863 | 41-3 | Orioles | Dell Ahalt |
| 864 | 41-4 | Mets | Todd Jones |
| 865 | 41-5 | Royals | Marvin Fight |
| 866 | 41-6 | Blue Jays | Steve Balstad |
| Round 42 | |||
| 867 | 42-1 | Braves | David Karasinski |
| 868 | 42-2 | Astros | George Fowler |
| 869 | 42-3 | Orioles | Doug Shields |
| 870 | 42-4 | Mets | Robert Sneed |
| 871 | 42-5 | Royals | Chris Airey |
| 872 | 42-6 | Blue Jays | Barry Morphew |
| Round 43 | |||
| 873 | 43-1 | Braves | Kerry Cahill |
| 874 | 43-2 | Astros | Tim MacNeil |
| 875 | 43-3 | Orioles | Franklin Martz |
| 876 | 43-4 | Mets | Phil Angelos |
| 877 | 43-5 | Royals | Steven Day |
| 878 | 43-6 | Blue Jays | Doug Linton |
| Round 44 | |||
| 879 | 44-1 | Astros | Richard Lodding |
| 880 | 44-2 | Orioles | Eric Cox |
| 881 | 44-3 | Royals | Richard Pfaff |
| 882 | 44-4 | Blue Jays | David Freese |
| Round 45 | |||
| 883 | 45-1 | Astros | Jose Lleneras |
| 884 | 45-2 | Orioles | Phil Williams |
| Round 46 | |||
| 885 | 46-1 | Astros | Mike Contreras |
| 886 | 46-2 | Orioles | Rod Steiner |
| Round 47 | |||
| 887 | 47-1 | Astros | Joe Bellezzo |
| 888 | 47-2 | Orioles | Casey Moore |
| Round 48 | |||
| 889 | 48-1 | Astros | Jason Brosnan |
| 890 | 48-2 | Orioles | David Arendas |
| Round 49 | |||
| 891 | 49-2 | Orioles | Daniel Johnston |
Rounds 1-10 Rounds 11-20 Rounds 21-30 Rounds 31-40 Rounds 41-49